J4_8W2N_013

3D structure

PDB id

8W2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCG*CGAAAG*CCGUAAACGAUG*CC

Length

23 nucleotides

Bulged bases

8W2N|1|2|C|576, 8W2N|1|2|A|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W2N|1|2|G|575
8W2N|1|2|C|576
8W2N|1|2|G|577
*
8W2N|1|2|C|764
8W2N|1|2|G|765
8W2N|1|2|A|766
8W2N|1|2|A|767
8W2N|1|2|A|768
8W2N|1|2|G|769
*
8W2N|1|2|C|810
8W2N|1|2|C|811
8W2N|1|2|G|812
8W2N|1|2|U|813
8W2N|1|2|A|814
8W2N|1|2|A|815
8W2N|1|2|A|816
8W2N|1|2|C|817
8W2N|1|2|G|818
8W2N|1|2|A|819
8W2N|1|2|U|820
8W2N|1|2|G|821
*
8W2N|1|2|C|879
8W2N|1|2|C|880

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain m

30S ribosomal protein S8

Chain q

30S ribosomal protein S12

Chain t

30S ribosomal protein S15

Chain v

30S ribosomal protein S17