J4_8WV1_002
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- AUGAGUAACGAUAAA*UC*GCGC*GGUGAAAUU
- Length
- 30 nucleotides
- Bulged bases
- 8WV1|1|A|G|1317, 8WV1|1|A|A|1318, 8WV1|1|A|U|1319, 8WV1|1|A|A|1320, 8WV1|1|A|C|1693, 8WV1|1|A|G|1694
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|A|1308
8WV1|1|A|U|1309
8WV1|1|A|G|1310
8WV1|1|A|A|1311
8WV1|1|A|G|1312
8WV1|1|A|U|1313
8WV1|1|A|A|1314
8WV1|1|A|A|1315
8WV1|1|A|C|1316
8WV1|1|A|G|1317
8WV1|1|A|A|1318
8WV1|1|A|U|1319
8WV1|1|A|A|1320
8WV1|1|A|A|1321
8WV1|1|A|A|1322
*
8WV1|1|A|U|1340
8WV1|1|A|C|1341
*
8WV1|1|A|G|1692
8WV1|1|A|C|1693
8WV1|1|A|G|1694
8WV1|1|A|C|1695
*
8WV1|1|A|G|2031
8WV1|1|A|G|2032
8WV1|1|A|U|2033
8WV1|1|A|G|2034
8WV1|1|A|A|2035
8WV1|1|A|A|2036
8WV1|1|A|A|2037
8WV1|1|A|U|2038
8WV1|1|A|U|2039
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain M
- 50S ribosomal protein L17
- Chain R
- 50S ribosomal protein L22
Coloring options: