J4_8WV1_013

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GACUG*CACAGCU*AGCGAC*GUAAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|a|G|1803
8WV1|1|a|A|1804
8WV1|1|a|C|1805
8WV1|1|a|U|1806
8WV1|1|a|G|1807
*
8WV1|1|a|C|1819
8WV1|1|a|A|1820
8WV1|1|a|C|1821
8WV1|1|a|A|1822
8WV1|1|a|G|1823
8WV1|1|a|C|1824
8WV1|1|a|U|1825
*
8WV1|1|a|A|1856
8WV1|1|a|G|1857
8WV1|1|a|C|1858
8WV1|1|a|G|1859
8WV1|1|a|A|1860
8WV1|1|a|C|1861
*
8WV1|1|a|G|1997
8WV1|1|a|U|1998
8WV1|1|a|A|1999
8WV1|1|a|A|2000
8WV1|1|a|C|2001

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2