J4_8ZEJ_012

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

8ZEJ|1|b|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|U|1313
8ZEJ|1|b|C|1314
*
8ZEJ|1|b|G|1338
8ZEJ|1|b|G|1339
8ZEJ|1|b|U|1340
8ZEJ|1|b|G|1341
8ZEJ|1|b|A|1342
8ZEJ|1|b|G|1343
*
8ZEJ|1|b|C|1404
8ZEJ|1|b|U|1405
*
8ZEJ|1|b|A|1597
8ZEJ|1|b|A|1598
8ZEJ|1|b|U|1599
8ZEJ|1|b|C|1600
8ZEJ|1|b|G|1601
8ZEJ|1|b|U|1602
8ZEJ|1|b|A|1603

Current chains

Chain b

23S rRNA

Nearby chains

Chain u

50S ribosomal protein L23