J4_8ZEJ_014

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|A|1772
8ZEJ|1|b|A|1773
8ZEJ|1|b|C|1774
8ZEJ|1|b|U|1775
8ZEJ|1|b|G|1776
*
8ZEJ|1|b|C|1788
8ZEJ|1|b|A|1789
8ZEJ|1|b|C|1790
8ZEJ|1|b|A|1791
8ZEJ|1|b|G|1792
*
8ZEJ|1|b|U|1827
8ZEJ|1|b|G|1828
8ZEJ|1|b|A|1829
8ZEJ|1|b|C|1830
*
8ZEJ|1|b|G|1975
8ZEJ|1|b|U|1976
8ZEJ|1|b|A|1977
8ZEJ|1|b|A|1978
8ZEJ|1|b|U|1979

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2