J4_8ZEJ_017

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|G|2643
8ZEJ|1|b|G|2644
8ZEJ|1|b|G|2645
8ZEJ|1|b|C|2646
*
8ZEJ|1|b|G|2674
8ZEJ|1|b|A|2675
8ZEJ|1|b|C|2676
*
8ZEJ|1|b|G|2731
8ZEJ|1|b|G|2732
8ZEJ|1|b|A|2733
8ZEJ|1|b|A|2734
8ZEJ|1|b|G|2735
*
8ZEJ|1|b|U|2769
8ZEJ|1|b|G|2770
8ZEJ|1|b|C|2771

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain k

50S ribosomal protein L13

Chain l

50S ribosomal protein L14