J4_8ZFF_002

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8ZFF|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFF|1|A|G|142
8ZFF|1|A|A|143
8ZFF|1|A|G|144
*
8ZFF|1|A|C|178
8ZFF|1|A|A|179
8ZFF|1|A|U|180
8ZFF|1|A|A|181
8ZFF|1|A|A|182
8ZFF|1|A|C|183
8ZFF|1|A|G|184
*
8ZFF|1|A|C|193
8ZFF|1|A|C|194
8ZFF|1|A|A|195
8ZFF|1|A|A|196
8ZFF|1|A|A|197
8ZFF|1|A|G|198
*
8ZFF|1|A|U|219
8ZFF|1|A|G|220
8ZFF|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20