J4_8ZFF_015

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFF|1|a|G|2643
8ZFF|1|a|G|2644
8ZFF|1|a|G|2645
8ZFF|1|a|C|2646
*
8ZFF|1|a|G|2674
8ZFF|1|a|A|2675
8ZFF|1|a|C|2676
*
8ZFF|1|a|G|2731
8ZFF|1|a|G|2732
8ZFF|1|a|A|2733
8ZFF|1|a|A|2734
8ZFF|1|a|G|2735
*
8ZFF|1|a|U|2769
8ZFF|1|a|G|2770
8ZFF|1|a|C|2771

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain i

Large ribosomal subunit protein uL13

Chain j

Large ribosomal subunit protein uL14