J4_8ZFG_002

3D structure

PDB id

8ZFG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.68 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8ZFG|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFG|1|A|G|142
8ZFG|1|A|A|143
8ZFG|1|A|G|144
*
8ZFG|1|A|C|178
8ZFG|1|A|A|179
8ZFG|1|A|U|180
8ZFG|1|A|A|181
8ZFG|1|A|A|182
8ZFG|1|A|C|183
8ZFG|1|A|G|184
*
8ZFG|1|A|C|193
8ZFG|1|A|C|194
8ZFG|1|A|A|195
8ZFG|1|A|A|196
8ZFG|1|A|A|197
8ZFG|1|A|G|198
*
8ZFG|1|A|U|219
8ZFG|1|A|G|220
8ZFG|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20