J4_8ZFI_017
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGC*GAC*GGAAG*UGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZFI|1|b|G|2643
8ZFI|1|b|G|2644
8ZFI|1|b|G|2645
8ZFI|1|b|C|2646
*
8ZFI|1|b|G|2674
8ZFI|1|b|A|2675
8ZFI|1|b|C|2676
*
8ZFI|1|b|G|2731
8ZFI|1|b|G|2732
8ZFI|1|b|A|2733
8ZFI|1|b|A|2734
8ZFI|1|b|G|2735
*
8ZFI|1|b|U|2769
8ZFI|1|b|G|2770
8ZFI|1|b|C|2771
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L13
- Chain l
- 50S ribosomal protein L14
Coloring options: