J4_9AXU_009

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CUAAG*UUG*CC*GUG

Length

13 nucleotides

Bulged bases

9AXU|1|2|A|2752

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|C|2749
9AXU|1|2|U|2750
9AXU|1|2|A|2751
9AXU|1|2|A|2752
9AXU|1|2|G|2753
*
9AXU|1|2|U|2807
9AXU|1|2|U|2808
9AXU|1|2|G|2809
*
9AXU|1|2|C|2836
9AXU|1|2|C|2837
*
9AXU|1|2|G|2846
9AXU|1|2|U|2847
9AXU|1|2|G|2848

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain 0

Large ribosomal subunit protein eL42

Chain Q

Large ribosomal subunit protein uL18B

Chain f

Large ribosomal subunit protein eL21B