J4_9B24_002

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UU*AAUACAC*GGAAAG*CG

Length

17 nucleotides

Bulged bases

9B24|1|A|C|179, 9B24|1|A|A|211

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B24|1|A|U|140
9B24|1|A|U|141
*
9B24|1|A|A|175
9B24|1|A|A|176
9B24|1|A|U|177
9B24|1|A|A|178
9B24|1|A|C|179
9B24|1|A|A|180
9B24|1|A|C|181
*
9B24|1|A|G|207
9B24|1|A|G|208
9B24|1|A|A|209
9B24|1|A|A|210
9B24|1|A|A|211
9B24|1|A|G|212
*
9B24|1|A|C|219
9B24|1|A|G|220

Current chains

Chain A

RNA (1528-MER)

Nearby chains

Chain Q

Small ribosomal subunit protein uS17

Chain T

Small ribosomal subunit protein bS20