J4_9B4Z_014

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|A|1772
9B4Z|1|BA|A|1773
9B4Z|1|BA|C|1774
9B4Z|1|BA|U|1775
9B4Z|1|BA|G|1776
*
9B4Z|1|BA|C|1788
9B4Z|1|BA|A|1789
9B4Z|1|BA|C|1790
9B4Z|1|BA|A|1791
9B4Z|1|BA|G|1792
*
9B4Z|1|BA|U|1827
9B4Z|1|BA|G|1828
9B4Z|1|BA|A|1829
9B4Z|1|BA|C|1830
*
9B4Z|1|BA|G|1975
9B4Z|1|BA|U|1976
9B4Z|1|BA|A|1977
9B4Z|1|BA|A|1978
9B4Z|1|BA|U|1979

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2