J4_9B50_005

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAAG*CGCG*CAG*CGUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|297
9B50|1|BA|G|298
9B50|1|BA|A|299
9B50|1|BA|A|300
9B50|1|BA|G|301
*
9B50|1|BA|C|316
9B50|1|BA|G|317
9B50|1|BA|C|318
9B50|1|BA|G|319
*
9B50|1|BA|C|323
9B50|1|BA|A|324
9B50|1|BA|G|325
*
9B50|1|BA|C|337
9B50|1|BA|G|338
9B50|1|BA|U|339
9B50|1|BA|A|340
9B50|1|BA|C|341

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BU

50S ribosomal protein L24