J4_9B50_008

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

9B50|1|BA|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|1310
9B50|1|BA|G|1311
9B50|1|BA|U|1312
9B50|1|BA|U|1313
9B50|1|BA|C|1314
*
9B50|1|BA|G|1338
9B50|1|BA|G|1339
9B50|1|BA|U|1340
9B50|1|BA|G|1341
9B50|1|BA|A|1342
9B50|1|BA|G|1343
*
9B50|1|BA|C|1404
9B50|1|BA|U|1405
*
9B50|1|BA|A|1597
9B50|1|BA|A|1598
9B50|1|BA|U|1599
9B50|1|BA|C|1600
9B50|1|BA|G|1601
9B50|1|BA|U|1602
9B50|1|BA|A|1603
9B50|1|BA|C|1604

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BT

50S ribosomal protein L23