J4_9B50_014

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|2643
9B50|1|BA|G|2644
9B50|1|BA|G|2645
9B50|1|BA|C|2646
*
9B50|1|BA|G|2674
9B50|1|BA|A|2675
9B50|1|BA|C|2676
*
9B50|1|BA|G|2731
9B50|1|BA|G|2732
9B50|1|BA|A|2733
9B50|1|BA|A|2734
9B50|1|BA|G|2735
*
9B50|1|BA|U|2769
9B50|1|BA|G|2770
9B50|1|BA|C|2771

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13

Chain BK

50S ribosomal protein L14