J4_9B51_009

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9B51|1|BA|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B51|1|BA|C|601
9B51|1|BA|A|602
9B51|1|BA|A|603
9B51|1|BA|G|604
*
9B51|1|BA|C|624
9B51|1|BA|G|625
9B51|1|BA|A|626
9B51|1|BA|A|627
9B51|1|BA|G|628
*
9B51|1|BA|C|635
9B51|1|BA|G|636
9B51|1|BA|A|637
9B51|1|BA|G|638
*
9B51|1|BA|C|650
9B51|1|BA|G|651
9B51|1|BA|U|652
9B51|1|BA|U|653
9B51|1|BA|A|654
9B51|1|BA|A|655
9B51|1|BA|G|656

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15