J4_9C3H_007

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9C3H|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|G|2618
9C3H|1|L5|G|2619
*
9C3H|1|L5|U|2637
9C3H|1|L5|G|2638
9C3H|1|L5|U|2639
9C3H|1|L5|G|2640
9C3H|1|L5|A|2641
9C3H|1|L5|A|2642
*
9C3H|1|L5|U|2692
9C3H|1|L5|G|2693
9C3H|1|L5|G|2694
9C3H|1|L5|A|2695
9C3H|1|L5|A|2696
9C3H|1|L5|A|2697
9C3H|1|L5|G|2698
*
9C3H|1|L5|U|2718
9C3H|1|L5|C|2719

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19

Chain Lg

Large ribosomal subunit protein eL34

Chain Lk

Large ribosomal subunit protein eL38

Chain Lm

Large ribosomal subunit protein eL22