J4_9CPA_003
3D structure
- PDB id
- 9CPA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- AAG*CGAAAG*CCAUAAACGAUG*UU
- Length
- 23 nucleotides
- Bulged bases
- 9CPA|1|2|A|662, 9CPA|1|2|A|1079
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9CPA|1|2|A|661
9CPA|1|2|A|662
9CPA|1|2|G|663
*
9CPA|1|2|C|1028
9CPA|1|2|G|1029
9CPA|1|2|A|1030
9CPA|1|2|A|1031
9CPA|1|2|A|1032
9CPA|1|2|G|1033
*
9CPA|1|2|C|1074
9CPA|1|2|C|1075
9CPA|1|2|A|1076
9CPA|1|2|U|1077
9CPA|1|2|A|1078
9CPA|1|2|A|1079
9CPA|1|2|A|1080
9CPA|1|2|C|1081
9CPA|1|2|G|1082
9CPA|1|2|A|1083
9CPA|1|2|U|1084
9CPA|1|2|G|1085
*
9CPA|1|2|U|1156
9CPA|1|2|U|1157
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 0
- Small ribosomal subunit protein uS11
- Chain N
- Ribosomal protein S11
- Chain P
- Ribosomal protein S13
- Chain Y
- Ribosomal protein S15a
- Chain Z
- uS12
- Chain b
- 40S ribosomal protein S26
- Chain l
- eL41
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