J4_9E0N_013
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GAG*CGAAAG*CCGUAAACGGUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 9E0N|1|a|A|556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0N|1|a|G|555
9E0N|1|a|A|556
9E0N|1|a|G|557
*
9E0N|1|a|C|744
9E0N|1|a|G|745
9E0N|1|a|A|746
9E0N|1|a|A|747
9E0N|1|a|A|748
9E0N|1|a|G|749
*
9E0N|1|a|C|790
9E0N|1|a|C|791
9E0N|1|a|G|792
9E0N|1|a|U|793
9E0N|1|a|A|794
9E0N|1|a|A|795
9E0N|1|a|A|796
9E0N|1|a|C|797
9E0N|1|a|G|798
9E0N|1|a|G|799
9E0N|1|a|U|800
9E0N|1|a|G|801
*
9E0N|1|a|C|861
9E0N|1|a|C|862
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain h
- Small ribosomal subunit protein uS8
- Chain l
- Small ribosomal subunit protein uS12
- Chain o
- Small ribosomal subunit protein uS15
- Chain q
- Small ribosomal subunit protein uS17
- Chain u
- Conserved domain protein
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