J4_9E0P_001

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*UAAG

Length

19 nucleotides

Bulged bases

9E0P|1|A|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|C|269
9E0P|1|A|U|270
9E0P|1|A|A|271
9E0P|1|A|A|272
9E0P|1|A|A|273
9E0P|1|A|C|274
*
9E0P|1|A|G|312
9E0P|1|A|G|313
9E0P|1|A|G|314
9E0P|1|A|U|315
9E0P|1|A|U|316
9E0P|1|A|G|317
*
9E0P|1|A|C|492
9E0P|1|A|U|493
9E0P|1|A|G|494
*
9E0P|1|A|U|509
9E0P|1|A|A|510
9E0P|1|A|A|511
9E0P|1|A|G|512

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9