J4_9E0P_005

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UC*GGUGAG*CC*GCCCGUA

Length

17 nucleotides

Bulged bases

9E0P|1|A|G|1456, 9E0P|1|A|A|1457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|U|1428
9E0P|1|A|C|1429
*
9E0P|1|A|G|1453
9E0P|1|A|G|1454
9E0P|1|A|U|1455
9E0P|1|A|G|1456
9E0P|1|A|A|1457
9E0P|1|A|G|1458
*
9E0P|1|A|C|1519
9E0P|1|A|C|1520
*
9E0P|1|A|G|1815
9E0P|1|A|C|1816
9E0P|1|A|C|1817
9E0P|1|A|C|1818
9E0P|1|A|G|1819
9E0P|1|A|U|1820
9E0P|1|A|A|1821

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

Large ribosomal subunit protein uL23