J4_9E0P_009

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CAAAG*UUGAC*GGG*CGG

Length

16 nucleotides

Bulged bases

9E0P|1|A|A|2512

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|C|2509
9E0P|1|A|A|2510
9E0P|1|A|A|2511
9E0P|1|A|A|2512
9E0P|1|A|G|2513
*
9E0P|1|A|U|2567
9E0P|1|A|U|2568
9E0P|1|A|G|2569
9E0P|1|A|A|2570
9E0P|1|A|C|2571
*
9E0P|1|A|G|2594
9E0P|1|A|G|2595
9E0P|1|A|G|2596
*
9E0P|1|A|C|2605
9E0P|1|A|G|2606
9E0P|1|A|G|2607

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL33A

Chain 6

Large ribosomal subunit protein bL35

Chain X

Large ribosomal subunit protein bL27