J4_9E0P_010

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

AACC*GAC*GGACA*UCU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|A|2867
9E0P|1|A|A|2868
9E0P|1|A|C|2869
9E0P|1|A|C|2870
*
9E0P|1|A|G|2898
9E0P|1|A|A|2899
9E0P|1|A|C|2900
*
9E0P|1|A|G|2955
9E0P|1|A|G|2956
9E0P|1|A|A|2957
9E0P|1|A|C|2958
9E0P|1|A|A|2959
*
9E0P|1|A|U|2993
9E0P|1|A|C|2994
9E0P|1|A|U|2995

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain K

Large ribosomal subunit protein uL13

Chain L

Large ribosomal subunit protein uL14