J4_9E16_004

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

9E16|1|I|G|1472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E16|1|I|G|1441
9E16|1|I|G|1442
9E16|1|I|U|1443
9E16|1|I|U|1444
9E16|1|I|C|1445
*
9E16|1|I|G|1469
9E16|1|I|G|1470
9E16|1|I|U|1471
9E16|1|I|G|1472
9E16|1|I|A|1473
9E16|1|I|G|1474
*
9E16|1|I|C|1535
9E16|1|I|C|1536
*
9E16|1|I|G|1832
9E16|1|I|C|1833
9E16|1|I|C|1834
9E16|1|I|C|1835
9E16|1|I|G|1836
9E16|1|I|U|1837
9E16|1|I|A|1838
9E16|1|I|C|1839

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 1

Ribosome-tunnel occlusion factor (RTOF)

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23