J4_9E16_006

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGACUG*CACAG*UGAC*GUAACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E16|1|I|C|2005
9E16|1|I|G|2006
9E16|1|I|A|2007
9E16|1|I|C|2008
9E16|1|I|U|2009
9E16|1|I|G|2010
*
9E16|1|I|C|2022
9E16|1|I|A|2023
9E16|1|I|C|2024
9E16|1|I|A|2025
9E16|1|I|G|2026
*
9E16|1|I|U|2061
9E16|1|I|G|2062
9E16|1|I|A|2063
9E16|1|I|C|2064
*
9E16|1|I|G|2213
9E16|1|I|U|2214
9E16|1|I|A|2215
9E16|1|I|A|2216
9E16|1|I|C|2217
9E16|1|I|G|2218

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain x

30S ribosomal protein S22