J4_9E1S_001

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CUAAAC*GGGUUG*CCG*UAAG

Length

19 nucleotides

Bulged bases

9E1S|1|I|U|317, 9E1S|1|I|C|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|C|270
9E1S|1|I|U|271
9E1S|1|I|A|272
9E1S|1|I|A|273
9E1S|1|I|A|274
9E1S|1|I|C|275
*
9E1S|1|I|G|313
9E1S|1|I|G|314
9E1S|1|I|G|315
9E1S|1|I|U|316
9E1S|1|I|U|317
9E1S|1|I|G|318
*
9E1S|1|I|C|493
9E1S|1|I|C|494
9E1S|1|I|G|495
*
9E1S|1|I|U|510
9E1S|1|I|A|511
9E1S|1|I|A|512
9E1S|1|I|G|513

Current chains

Chain I

23S ribosomal RNA

Nearby chains