J4_9E1S_006

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CGACUG*CACAG*UGAC*GUAACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|C|2005
9E1S|1|I|G|2006
9E1S|1|I|A|2007
9E1S|1|I|C|2008
9E1S|1|I|U|2009
9E1S|1|I|G|2010
*
9E1S|1|I|C|2022
9E1S|1|I|A|2023
9E1S|1|I|C|2024
9E1S|1|I|A|2025
9E1S|1|I|G|2026
*
9E1S|1|I|U|2061
9E1S|1|I|G|2062
9E1S|1|I|A|2063
9E1S|1|I|C|2064
*
9E1S|1|I|G|2213
9E1S|1|I|U|2214
9E1S|1|I|A|2215
9E1S|1|I|A|2216
9E1S|1|I|C|2217
9E1S|1|I|G|2218

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2