J4_9E1S_009

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

AAACC*GAC*GGUCA*UUCU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|A|2880
9E1S|1|I|A|2881
9E1S|1|I|A|2882
9E1S|1|I|C|2883
9E1S|1|I|C|2884
*
9E1S|1|I|G|2912
9E1S|1|I|A|2913
9E1S|1|I|C|2914
*
9E1S|1|I|G|2969
9E1S|1|I|G|2970
9E1S|1|I|U|2971
9E1S|1|I|C|2972
9E1S|1|I|A|2973
*
9E1S|1|I|U|3007
9E1S|1|I|U|3008
9E1S|1|I|C|3009
9E1S|1|I|U|3010

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

Large ribosomal subunit protein uL14