J4_9EHO_005
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*CGUAAA*UGUAGAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 9EHO|1|5|G|2543
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|G|2466
9EHO|1|5|G|2467
*
9EHO|1|5|C|2485
9EHO|1|5|G|2486
9EHO|1|5|U|2487
9EHO|1|5|A|2488
9EHO|1|5|A|2489
9EHO|1|5|A|2490
*
9EHO|1|5|U|2539
9EHO|1|5|G|2540
9EHO|1|5|U|2541
9EHO|1|5|A|2542
9EHO|1|5|G|2543
9EHO|1|5|A|2544
9EHO|1|5|G|2545
*
9EHO|1|5|U|2565
9EHO|1|5|C|2566
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain R
- Ribosomal protein L19
- Chain U
- Large ribosomal subunit protein eL22
- Chain g
- Large ribosomal subunit protein eL34
- Chain k
- eL38
Coloring options: