J4_9GFT_011
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAGC*GCGCG*CAG*CGUAC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GFT|1|AV|G|297
9GFT|1|AV|G|298
9GFT|1|AV|A|299
9GFT|1|AV|A|300
9GFT|1|AV|G|301
9GFT|1|AV|C|302
*
9GFT|1|AV|G|315
9GFT|1|AV|C|316
9GFT|1|AV|G|317
9GFT|1|AV|C|318
9GFT|1|AV|G|319
*
9GFT|1|AV|C|323
9GFT|1|AV|A|324
9GFT|1|AV|G|325
*
9GFT|1|AV|C|337
9GFT|1|AV|G|338
9GFT|1|AV|U|339
9GFT|1|AV|A|340
9GFT|1|AV|C|341
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AZ
- Large ribosomal subunit protein uL4
- Chain Ap
- Large ribosomal subunit protein uL24
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