J4_9GUL_008

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GACUG*CAAAG*UGAUU*AUGA(A2M)C

Length

21 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|G|3634
9GUL|1|L5|A|3635
9GUL|1|L5|C|3636
9GUL|1|L5|U|3637
9GUL|1|L5|G|3638
*
9GUL|1|L5|C|3650
9GUL|1|L5|A|3651
9GUL|1|L5|A|3652
9GUL|1|L5|A|3653
9GUL|1|L5|G|3654
*
9GUL|1|L5|U|3690
9GUL|1|L5|G|3691
9GUL|1|L5|A|3692
9GUL|1|L5|U|3693
9GUL|1|L5|U|3694
*
9GUL|1|L5|A|3821
9GUL|1|L5|U|3822
9GUL|1|L5|G|3823
9GUL|1|L5|A|3824
9GUL|1|L5|A2M|3825
9GUL|1|L5|C|3826

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Lp

60S ribosomal protein L37a