J4_9H3G_004
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- GGUUC*GGUUAG*CC*GGUCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 9H3G|1|A|U|1532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3G|1|A|G|1501
9H3G|1|A|G|1502
9H3G|1|A|U|1503
9H3G|1|A|U|1504
9H3G|1|A|C|1505
*
9H3G|1|A|G|1529
9H3G|1|A|G|1530
9H3G|1|A|U|1531
9H3G|1|A|U|1532
9H3G|1|A|A|1533
9H3G|1|A|G|1534
*
9H3G|1|A|C|1615
9H3G|1|A|C|1616
*
9H3G|1|A|G|1831
9H3G|1|A|G|1832
9H3G|1|A|U|1833
9H3G|1|A|C|1834
9H3G|1|A|G|1835
9H3G|1|A|U|1836
9H3G|1|A|A|1837
9H3G|1|A|C|1838
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AK
- Large ribosomal subunit protein eL19x
- Chain AY
- Large ribosomal subunit protein eL37z
- Chain AZ
- Large ribosomal subunit protein eL38z/eL38y
- Chain BA
- Large ribosomal subunit protein eL39z/eL39x
- Chain BN
- Large ribosomal subunit protein uL23y
- Chain Fa
- Large ribosomal subunit protein eL34z
Coloring options: