J4_9H3Q_003
3D structure
- PDB id
- 9H3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor C-CP_YjgA_(L22)-~H61
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.02 Å
Loop
- Sequence
- AUAAGUAACGAUAAA*UC*GCUUGAGAGAAC*GACUCAGUGAAAUU
- Length
- 43 nucleotides
- Bulged bases
- 9H3Q|1|A|G|1271, 9H3Q|1|A|A|1272, 9H3Q|1|A|U|1273, 9H3Q|1|A|A|1275, 9H3Q|1|A|U|1647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3Q|1|A|A|1262
9H3Q|1|A|U|1263
9H3Q|1|A|A|1264
9H3Q|1|A|A|1265
9H3Q|1|A|G|1266
9H3Q|1|A|U|1267
9H3Q|1|A|A|1268
9H3Q|1|A|A|1269
9H3Q|1|A|C|1270
9H3Q|1|A|G|1271
9H3Q|1|A|A|1272
9H3Q|1|A|U|1273
9H3Q|1|A|A|1274
9H3Q|1|A|A|1275
9H3Q|1|A|A|1276
*
9H3Q|1|A|U|1294
9H3Q|1|A|C|1295
*
9H3Q|1|A|G|1645
9H3Q|1|A|C|1646
9H3Q|1|A|U|1647
9H3Q|1|A|U|1648
9H3Q|1|A|G|1649
9H3Q|1|A|A|1650
9H3Q|1|A|G|1651
9H3Q|1|A|A|1652
9H3Q|1|A|G|1653
9H3Q|1|A|A|1654
9H3Q|1|A|A|1655
9H3Q|1|A|C|1656
*
9H3Q|1|A|G|2004
9H3Q|1|A|A|2005
9H3Q|1|A|C|2006
9H3Q|1|A|U|2007
9H3Q|1|A|C|2008
9H3Q|1|A|A|2009
9H3Q|1|A|G|2010
9H3Q|1|A|U|2011
9H3Q|1|A|G|2012
9H3Q|1|A|A|2013
9H3Q|1|A|A|2014
9H3Q|1|A|A|2015
9H3Q|1|A|U|2016
9H3Q|1|A|U|2017
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain N
- Large ribosomal subunit protein bL17
Coloring options: