J4_9H3W_011

3D structure

PDB id

9H3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

5.38 Å

Loop

Sequence

GGGCUGC*GUGGAC*GGAAG*UGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3W|1|A|G|2643
9H3W|1|A|G|2644
9H3W|1|A|G|2645
9H3W|1|A|C|2646
9H3W|1|A|U|2647
9H3W|1|A|G|2648
9H3W|1|A|C|2649
*
9H3W|1|A|G|2671
9H3W|1|A|U|2672
9H3W|1|A|G|2673
9H3W|1|A|G|2674
9H3W|1|A|A|2675
9H3W|1|A|C|2676
*
9H3W|1|A|G|2731
9H3W|1|A|G|2732
9H3W|1|A|A|2733
9H3W|1|A|A|2734
9H3W|1|A|G|2735
*
9H3W|1|A|U|2769
9H3W|1|A|G|2770
9H3W|1|A|C|2771

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain K

Large ribosomal subunit protein uL14