J4_9H6I_002
3D structure
- PDB id
- 9H6I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CC*GAGUCG*CCAAUCG*CAAG
- Length
- 19 nucleotides
- Bulged bases
- 9H6I|1|A|C|295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H6I|1|A|C|110
9H6I|1|A|C|111
*
9H6I|1|A|G|264
9H6I|1|A|A|265
9H6I|1|A|G|266
9H6I|1|A|U|267
9H6I|1|A|C|268
9H6I|1|A|G|269
*
9H6I|1|A|C|290
9H6I|1|A|C|291
9H6I|1|A|A|292
9H6I|1|A|A|293
9H6I|1|A|U|294
9H6I|1|A|C|295
9H6I|1|A|G|296
*
9H6I|1|A|C|313
9H6I|1|A|A|314
9H6I|1|A|A|315
9H6I|1|A|G|316
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AG
- Large ribosomal subunit protein eL13z
- Chain AX
- Large ribosomal subunit protein eL36y
- Chain BP
- Large ribosomal subunit protein uL29x
- Chain Ea
- Large ribosomal subunit protein eL15z
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