J4_9H74_001
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGCGC*GCGUGC*GAGGUCG*CC
- Length
- 22 nucleotides
- Bulged bases
- 9H74|1|1|U|9, 9H74|1|1|G|10, 9H74|1|1|G|45, 9H74|1|1|G|46, 9H74|1|1|U|47, 9H74|1|1|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H74|1|1|G|8
9H74|1|1|U|9
9H74|1|1|G|10
9H74|1|1|G|11
9H74|1|1|C|12
9H74|1|1|G|13
9H74|1|1|C|14
*
9H74|1|1|G|22
9H74|1|1|C|23
9H74|1|1|G|24
9H74|1|1|U|25
9H74|1|1|G|26
9H74|1|1|C|27
*
9H74|1|1|G|43
9H74|1|1|A|44
9H74|1|1|G|45
9H74|1|1|G|46
9H74|1|1|U|47
9H74|1|1|C|48
9H74|1|1|G|49
*
9H74|1|1|C|65
9H74|1|1|C|66
Current chains
- Chain 1
- Initiator methionylated tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A
- Eukaryotic translation initiation factor 2 subunit 1
- Chain U
- 40S ribosomal protein uS13
- Chain o
- Eukaryotic translation initiation factor 5
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