J4_9H74_003
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AAG*CGAAAG*CCAUAAACGAUG*UU
- Length
- 23 nucleotides
- Bulged bases
- 9H74|1|2|A|662, 9H74|1|2|A|1079, 9H74|1|2|C|1081, 9H74|1|2|A|1083
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H74|1|2|A|661
9H74|1|2|A|662
9H74|1|2|G|663
*
9H74|1|2|C|1028
9H74|1|2|G|1029
9H74|1|2|A|1030
9H74|1|2|A|1031
9H74|1|2|A|1032
9H74|1|2|G|1033
*
9H74|1|2|C|1074
9H74|1|2|C|1075
9H74|1|2|A|1076
9H74|1|2|U|1077
9H74|1|2|A|1078
9H74|1|2|A|1079
9H74|1|2|A|1080
9H74|1|2|C|1081
9H74|1|2|G|1082
9H74|1|2|A|1083
9H74|1|2|U|1084
9H74|1|2|G|1085
*
9H74|1|2|U|1156
9H74|1|2|U|1157
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain N
- 40S ribosomal protein S11
- Chain P
- 40S ribosomal protein S13
- Chain Q
- 40S ribosomal protein uS11
- Chain Y
- Ribosomal protein S15a
- Chain Z
- 40S ribosomal protein S23
- Chain b
- 40S ribosomal protein S26
- Chain l
- 60S ribosomal protein L41
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