J4_9H8G_002

3D structure

PDB id

9H8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 5 30S-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

2.09 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9H8G|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H8G|1|A|G|142
9H8G|1|A|A|143
9H8G|1|A|G|144
*
9H8G|1|A|C|178
9H8G|1|A|A|179
9H8G|1|A|U|180
9H8G|1|A|A|181
9H8G|1|A|A|182
9H8G|1|A|C|183
9H8G|1|A|G|184
*
9H8G|1|A|C|193
9H8G|1|A|C|194
9H8G|1|A|A|195
9H8G|1|A|A|196
9H8G|1|A|A|197
9H8G|1|A|G|198
*
9H8G|1|A|U|219
9H8G|1|A|G|220
9H8G|1|A|C|221

Current chains

Chain A

16S rRNA fragment (1078-MER)

Nearby chains

Chain T

Small ribosomal subunit protein bS20