J4_9H9H_003

3D structure

PDB id

9H9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 1 30S-IF1-IF2-IF3-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9H9H|1|A|C|183, 9H9H|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H9H|1|A|G|142
9H9H|1|A|A|143
9H9H|1|A|G|144
*
9H9H|1|A|C|178
9H9H|1|A|A|179
9H9H|1|A|U|180
9H9H|1|A|A|181
9H9H|1|A|A|182
9H9H|1|A|C|183
9H9H|1|A|G|184
*
9H9H|1|A|C|193
9H9H|1|A|C|194
9H9H|1|A|A|195
9H9H|1|A|A|196
9H9H|1|A|A|197
9H9H|1|A|G|198
*
9H9H|1|A|U|219
9H9H|1|A|G|220
9H9H|1|A|C|221

Current chains

Chain A

16S RNA (1534-MER)

Nearby chains

Chain T

Small ribosomal subunit protein bS20