J4_9H9J_003
3D structure
- PDB id
- 9H9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 2 (BODY) 30S-IF1-IF3-tRNA-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 9H9J|1|A|C|576, 9H9J|1|A|A|815, 9H9J|1|A|C|817, 9H9J|1|A|A|819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H9J|1|A|G|575
9H9J|1|A|C|576
9H9J|1|A|G|577
*
9H9J|1|A|C|764
9H9J|1|A|G|765
9H9J|1|A|A|766
9H9J|1|A|A|767
9H9J|1|A|A|768
9H9J|1|A|G|769
*
9H9J|1|A|C|810
9H9J|1|A|C|811
9H9J|1|A|G|812
9H9J|1|A|U|813
9H9J|1|A|A|814
9H9J|1|A|A|815
9H9J|1|A|A|816
9H9J|1|A|C|817
9H9J|1|A|G|818
9H9J|1|A|A|819
9H9J|1|A|U|820
9H9J|1|A|G|821
*
9H9J|1|A|C|879
9H9J|1|A|C|880
Current chains
- Chain A
- 16S RNA (1078-MER)
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
- Chain U
- Small ribosomal subunit protein bS21
Coloring options: