J4_9H9N_002

3D structure

PDB id

9H9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 4 (BODY) 30S-GE81112 (weak residual tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9H9N|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H9N|1|A|G|142
9H9N|1|A|A|143
9H9N|1|A|G|144
*
9H9N|1|A|C|178
9H9N|1|A|A|179
9H9N|1|A|U|180
9H9N|1|A|A|181
9H9N|1|A|A|182
9H9N|1|A|C|183
9H9N|1|A|G|184
*
9H9N|1|A|C|193
9H9N|1|A|C|194
9H9N|1|A|A|195
9H9N|1|A|A|196
9H9N|1|A|A|197
9H9N|1|A|G|198
*
9H9N|1|A|U|219
9H9N|1|A|G|220
9H9N|1|A|C|221

Current chains

Chain A

16S RNA (1078-MER)

Nearby chains

Chain T

Small ribosomal subunit protein bS20