J4_9HLZ_001
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAUAA*UAUAA*UAUAGUAAGUAC*GGAAAG
- Length
- 29 nucleotides
- Bulged bases
- 9HLZ|1|AA|U|69, 9HLZ|1|AA|U|93, 9HLZ|1|AA|U|383, 9HLZ|1|AA|A|384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HLZ|1|AA|U|66
9HLZ|1|AA|A|67
9HLZ|1|AA|A|68
9HLZ|1|AA|U|69
9HLZ|1|AA|A|70
9HLZ|1|AA|A|71
*
9HLZ|1|AA|U|91
9HLZ|1|AA|A|92
9HLZ|1|AA|U|93
9HLZ|1|AA|A|94
9HLZ|1|AA|A|95
*
9HLZ|1|AA|U|381
9HLZ|1|AA|A|382
9HLZ|1|AA|U|383
9HLZ|1|AA|A|384
9HLZ|1|AA|G|385
9HLZ|1|AA|U|386
9HLZ|1|AA|A|387
9HLZ|1|AA|A|388
9HLZ|1|AA|G|389
9HLZ|1|AA|U|390
9HLZ|1|AA|A|391
9HLZ|1|AA|C|392
*
9HLZ|1|AA|G|399
9HLZ|1|AA|G|400
9HLZ|1|AA|A|401
9HLZ|1|AA|A|402
9HLZ|1|AA|A|403
9HLZ|1|AA|G|404
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain 33
- Large ribosomal subunit protein mL41
- Chain DD
- Large ribosomal subunit protein uL4m
- Chain PP
- Large ribosomal subunit protein uL23m
- Chain QQ
- Large ribosomal subunit protein uL24m
- Chain YY
- Large ribosomal subunit protein bL34m
Coloring options: