J4_9HLZ_002

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUCCUAAU*AA*UAU*AAUA

Length

17 nucleotides

Bulged bases

9HLZ|1|AA|A|1169, 9HLZ|1|AA|U|1170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|U|930
9HLZ|1|AA|U|931
9HLZ|1|AA|C|932
9HLZ|1|AA|C|933
9HLZ|1|AA|U|934
9HLZ|1|AA|A|935
9HLZ|1|AA|A|936
9HLZ|1|AA|U|937
*
9HLZ|1|AA|A|1126
9HLZ|1|AA|A|1127
*
9HLZ|1|AA|U|1142
9HLZ|1|AA|A|1143
9HLZ|1|AA|U|1144
*
9HLZ|1|AA|A|1168
9HLZ|1|AA|A|1169
9HLZ|1|AA|U|1170
9HLZ|1|AA|A|1171

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain HH

Large ribosomal subunit protein uL13m

Chain aa

Large ribosomal subunit protein mL58

Chain cc

Large ribosomal subunit protein mL60