J4_9HLZ_005

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACUG*CACCG*UGAACU*ACGUAAU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|1679
9HLZ|1|AA|A|1680
9HLZ|1|AA|C|1681
9HLZ|1|AA|U|1682
9HLZ|1|AA|G|1683
*
9HLZ|1|AA|C|1695
9HLZ|1|AA|A|1696
9HLZ|1|AA|C|1697
9HLZ|1|AA|C|1698
9HLZ|1|AA|G|1699
*
9HLZ|1|AA|U|1735
9HLZ|1|AA|G|1736
9HLZ|1|AA|A|1737
9HLZ|1|AA|A|1738
9HLZ|1|AA|C|1739
9HLZ|1|AA|U|1740
*
9HLZ|1|AA|A|1873
9HLZ|1|AA|C|1874
9HLZ|1|AA|G|1875
9HLZ|1|AA|U|1876
9HLZ|1|AA|A|1877
9HLZ|1|AA|A|1878
9HLZ|1|AA|U|1879

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 1

Small ribosomal subunit protein mS38

Chain BB

Large ribosomal subunit protein uL2m

Chain r

Small subunit ribosomal RNA; SSU rRNA