J4_9HLZ_007

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUCU*AA*UAAUA*UGUU

Length

15 nucleotides

Bulged bases

9HLZ|1|AA|A|3069

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|2910
9HLZ|1|AA|U|2911
9HLZ|1|AA|C|2912
9HLZ|1|AA|U|2913
*
9HLZ|1|AA|A|2941
9HLZ|1|AA|A|2942
*
9HLZ|1|AA|U|3068
9HLZ|1|AA|A|3069
9HLZ|1|AA|A|3070
9HLZ|1|AA|U|3071
9HLZ|1|AA|A|3072
*
9HLZ|1|AA|U|3105
9HLZ|1|AA|G|3106
9HLZ|1|AA|U|3107
9HLZ|1|AA|U|3108

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain CC

Large ribosomal subunit protein uL3m

Chain HH

Large ribosomal subunit protein uL13m

Chain II

Large ribosomal subunit protein uL14m