J4_9HLZ_010
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAUA*UAAUUUUU*AUAUAUUAAUAU*AAAA
- Length
- 29 nucleotides
- Bulged bases
- 9HLZ|1|r|U|1272, 9HLZ|1|r|U|1365, 9HLZ|1|r|U|1366, 9HLZ|1|r|A|1370
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HLZ|1|r|U|1269
9HLZ|1|r|A|1270
9HLZ|1|r|A|1271
9HLZ|1|r|U|1272
9HLZ|1|r|A|1273
*
9HLZ|1|r|U|1336
9HLZ|1|r|A|1337
9HLZ|1|r|A|1338
9HLZ|1|r|U|1339
9HLZ|1|r|U|1340
9HLZ|1|r|U|1341
9HLZ|1|r|U|1342
9HLZ|1|r|U|1343
*
9HLZ|1|r|A|1360
9HLZ|1|r|U|1361
9HLZ|1|r|A|1362
9HLZ|1|r|U|1363
9HLZ|1|r|A|1364
9HLZ|1|r|U|1365
9HLZ|1|r|U|1366
9HLZ|1|r|A|1367
9HLZ|1|r|A|1368
9HLZ|1|r|U|1369
9HLZ|1|r|A|1370
9HLZ|1|r|U|1371
*
9HLZ|1|r|A|1402
9HLZ|1|r|A|1403
9HLZ|1|r|A|1404
9HLZ|1|r|A|1405
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7m
- Chain M
- Small ribosomal subunit protein uS13m
- Chain W
- Small ribosomal subunit protein mS29
Coloring options: