J4_9HLZ_011

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUGAUG*CA*UUAUAUACG*CGUAUU

Length

23 nucleotides

Bulged bases

9HLZ|1|t|A|47

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|t|A|7
9HLZ|1|t|U|8
9HLZ|1|t|G|9
9HLZ|1|t|A|10
9HLZ|1|t|U|11
9HLZ|1|t|G|12
*
9HLZ|1|t|C|24
9HLZ|1|t|A|25
*
9HLZ|1|t|U|45
9HLZ|1|t|U|46
9HLZ|1|t|A|47
9HLZ|1|t|U|48
9HLZ|1|t|A|49
9HLZ|1|t|U|50
9HLZ|1|t|A|51
9HLZ|1|t|C|52
9HLZ|1|t|G|53
*
9HLZ|1|t|C|61
9HLZ|1|t|G|62
9HLZ|1|t|U|63
9HLZ|1|t|A|64
9HLZ|1|t|U|65
9HLZ|1|t|U|66

Current chains

Chain t

E/E-site formyl-methionine tRNA

Nearby chains

Chain XX

Large ribosomal subunit protein bL33m