J4_9HM0_007

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUCU*AA*UAAUA*UGUU

Length

15 nucleotides

Bulged bases

9HM0|1|AA|A|3069

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|A|2910
9HM0|1|AA|U|2911
9HM0|1|AA|C|2912
9HM0|1|AA|U|2913
*
9HM0|1|AA|A|2941
9HM0|1|AA|A|2942
*
9HM0|1|AA|U|3068
9HM0|1|AA|A|3069
9HM0|1|AA|A|3070
9HM0|1|AA|U|3071
9HM0|1|AA|A|3072
*
9HM0|1|AA|U|3105
9HM0|1|AA|G|3106
9HM0|1|AA|U|3107
9HM0|1|AA|U|3108

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain CC

Large ribosomal subunit protein uL3m

Chain HH

Large ribosomal subunit protein uL13m

Chain II

Large ribosomal subunit protein uL14m