J4_9I1W_007
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GAC(PSU)G*CAUAG*UGAUU*AUUAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|1|G|2093
9I1W|1|1|A|2094
9I1W|1|1|C|2095
9I1W|1|1|PSU|2096
9I1W|1|1|G|2097
*
9I1W|1|1|C|2109
9I1W|1|1|A|2110
9I1W|1|1|U|2111
9I1W|1|1|A|2112
9I1W|1|1|G|2113
*
9I1W|1|1|U|2149
9I1W|1|1|G|2150
9I1W|1|1|A|2151
9I1W|1|1|U|2152
9I1W|1|1|U|2153
*
9I1W|1|1|A|2280
9I1W|1|1|U|2281
9I1W|1|1|U|2282
9I1W|1|1|A|2283
9I1W|1|1|A|2284
9I1W|1|1|C|2285
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain Ln
- 60S ribosomal protein L41-A
- Chain Lp
- 60S ribosomal protein L43-like protein
Coloring options: